entrezparse, a perl script to extract useful information from entrez's somewhat hard-to-use flat-files
gameoflife.R, an R script that performs the game of life (which everyone loves)
plot.R, an example R script showing how to create a relatively nice looking graph
BoP_plot.R, an R script that produces a plot of how people have done on each question of the the "Biology or Physics?" game. Includes a function for downloading and parsing the log.txt file
I also have a bunch of sequence analysis code written in Python, based on Richard Durbin et al's Biological Sequence Analysis (amazon), but it was my first attempt at programming in python and is somewhat disordered and messy. If anyone wants to take a look, e-mail me and I'll try and put it in order.
sequence.py, some python functions for sequence analysis (a work in progress)
See also here for code related to my MPhil thesis.
Licensing
While as of yet there isn't really anything here that many people could make use of, this code is licensed under the GNU Public License version 3.0. Basically, you may use it, modify it and redistribute it, providing you allow others to do the same to anything you produce from it. This section is mostly included for completeness, and in case anything of more use is placed here.
Save the cheerleader, save the world.